Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869674.1_cds_XP_016433829.1_29949
CDS Infomation

[gene=LOC107760309] [db_xref=GeneID:107760309] [protein=B3 domain-containing transcription factor ABI3-like] [protein_id=XP_016433829.1] [location=complement(join(126527..126646,126749..126825,126954..127000,127111..127211,127313..127405,128012..129715))] [gbkey=CDS]
Sequence

ATGAAAAGAGGATTAGAGTATCATGGTAGGCAAGATTTGGAGGATGGATTAGAGAATGTT
ATGGTTGTTATGGATGATATTCAAAGCCAGCACCACCACCAGCAGACTACTGAATTTGTA
CCTATGGAGGAAGAACAAGTACTTGGGGCTATTGTGGGTGACACTGAGATTTTTCTTAAT
GAAGATGGTAGTCATTCACATCATCATCATCATCATCTTGATGTGAATGACACTTCCATT
TTTTCCACCGACTTCCTCCCTCTCCCTGATTTCCCATGCATGTCTTCTTCTTCATCAACT
TCTTCAGCCCCTACTGCTCTTTCTAAGCCTTTTCCTACTTCCTCTTCATCGTCTTCGGCT
TCTTCTTCTAATTCTGCTTCATGGGCAGTTCTTAAATCCGACGCAGAAGAAAATGTTCAC
AAGAAAATCCAACCACCAGCTTTGTCATCCACCACTTCAATGGAATTAAGTCTCCCTCTG
CCAGAAGATGATGTTGATTGCTTAAACGTTATGGAAGATCTTGGATACATGGATCTTATC
GATGGAAATGAATTTTGGGATCCTTGTACACTTTTCCAAACTGATAATCAAAATCCACAA
GATTACAACATGTCAGATCAGTCATTCCAAGTCTCACAAGATCATCAGCAGAATCAAGAA
AGCAAACCGCAGCTTGAAGAAGGTGATGATGATCCAAATGATGGGCTGAGTTTTTTCACA
GGTAACGGCGAGCTAGCTGTTATCTTCTTCGAGTGGCTGAAGCAAAACAAAGACTACATC
TCTGCGGAAGACATGAGGAGTATTAAGCTCAAGCGTTCCACTATAGAAAGTGCTTCGAAA
CGCTTGGGCGGCACCAAAGAAGGGAAGAAGCAGCTGTTGAGACTCATACTTGAATGGGTT
GAACAATACCAACTGCAAAAGAAACGAATGAAAGAAGAAGCAGCAGCTACTGCCGCCTCT
GATTCTCAGTGTCAGTATCAAGAGTCTCAGCTTCATGATTCGAACCCTAACCGGAACCCC
AGTTTCCAGTATAATAACGCTGTTGCATCTGATCCAAGTTCTTGCTTCTATCCTTCGCCA
TGGATGCCAACTCCCTCTCCTTATATCCCCGGCCCCGATCCCTTTTTCTCGACTCCTATG
GCGCCGGGTTACGCAGGGGATCCTTACTCTAATGTACCTTCATTTACAAATATGGAGTAT
CAGACCATGGAATCTGCTCAATCCTGGCCTCCATCGCAATTCTCCGCGATGGAAGCTTCT
CAATACAATCCATATCCTGAAAATGAAAATAACCTCGCCACTAATGCTAATCCTCAGGGT
TTGTTCAGTCAATATCCTTACCAACTTTACGATGGGAATGGCGAGAGATTGGCGAGGTTG
GGCTCATCTGCTACTAAAGAGGCTAGGAAAAAGAGAATGGCTCGGCAGAGGCGATTACCG
TCGCACCATTATCGCCACCACAGCCATCAAACTCAGCATCAGAGCCAAAGTAGTGACCAA
AGTTTAAGGTTAAGTGGAGAGAATTGTACAATGTCTCCAGCTAATAATCCTGGGAATTGG
GTATATTGGCCTTCTGCTGCTCCGTCACCAATGATGATGGTTCCACCACGTGAGGCACCA
CAGCCACATCCTATGACCGAGAGTCCCGGGATGCAACCTCAGAACCGTCAAAAGCATGCT
TCTTCCGCAGACAAGCGATCACAGGGTTGGAAATCGGAGAAGAACCTGAAGTTCCTATTA
CAGAAAGTGCTGAAGCAGAGCGATGTTGGCAATCTTGGAAGAATTGTGCTGCCAAAGAAA
GAAGCAGAATCGCACCTCCCAGAACTTGAATCAAGAGATGGAATTTCAATTGCTATGGAA
GATATTGGAACTTCTCGTGTTTGGAACATGAAGTATAGATTTTGGCCAAATAACAAAAGC
AGGATGTACCTTCTGGAGAACACAGGAGATTTTGTTCGAGCTAATGGACTTCAAGAAGGA
GATTTCATCGTAATATACGCAGACACCAAGTGTGGCAAATATTTGATACGGGGAGTAAAG
GTGAGACAAAGTGGACCAAAAGCAGAAGGAAAGAAACCGGCAAAGAAAAACGTTCGTAAT
TCGTCTTCTGCAGTTGCACTGATGAAGCAACTGGTGAAGTAG

Peptide Sequence

PEP ID

XP_016433829.1
PEP Infomation

PREDICTED: B3 domain-containing transcription factor ABI3-like [Nicotiana tabacum]
Sequence

MKRGLEYHGRQDLEDGLENVMVVMDDIQSQHHHQQTTEFVPMEEEQVLGAIVGDTEIFLN
EDGSHSHHHHHHLDVNDTSIFSTDFLPLPDFPCMSSSSSTSSAPTALSKPFPTSSSSSSA
SSSNSASWAVLKSDAEENVHKKIQPPALSSTTSMELSLPLPEDDVDCLNVMEDLGYMDLI
DGNEFWDPCTLFQTDNQNPQDYNMSDQSFQVSQDHQQNQESKPQLEEGDDDPNDGLSFFT
GNGELAVIFFEWLKQNKDYISAEDMRSIKLKRSTIESASKRLGGTKEGKKQLLRLILEWV
EQYQLQKKRMKEEAAATAASDSQCQYQESQLHDSNPNRNPSFQYNNAVASDPSSCFYPSP
WMPTPSPYIPGPDPFFSTPMAPGYAGDPYSNVPSFTNMEYQTMESAQSWPPSQFSAMEAS
QYNPYPENENNLATNANPQGLFSQYPYQLYDGNGERLARLGSSATKEARKKRMARQRRLP
SHHYRHHSHQTQHQSQSSDQSLRLSGENCTMSPANNPGNWVYWPSAAPSPMMMVPPREAP
QPHPMTESPGMQPQNRQKHASSADKRSQGWKSEKNLKFLLQKVLKQSDVGNLGRIVLPKK
EAESHLPELESRDGISIAMEDIGTSRVWNMKYRFWPNNKSRMYLLENTGDFVRANGLQEG
DFIVIYADTKCGKYLIRGVKVRQSGPKAEGKKPAKKNVRNSSSAVALMKQLVK

Transcript Sequence

Gene sequence data has not been registered.